Additional References

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“Identification of evolutionarily conserved nuclear matrix proteins and their prokaryotic origins” (2019)

Fungal Invasion May Drive Some Pancreatic Cancers (2019)

Circular DNA elements of chromosomal origin are common in healthy human somatic tissue (2018)

A butterfly chromonome reveals selection dynamics during extensive and cryptic chromosomal reshuffling (2018)

G-Quadruplexes and DNA Replication Origins (2017)

Normal and Cancerous Tissues Release extrachromosomal circular DNA (eccDNA) into the Circulation (2017)

Transfer of DNA from Bacteria to Eukaryotes (2016)

Horizontal gene transfer (2016)

Origin of eukaryotes from within archaea, archaeal eukaryome and bursts of gene gain: eukaryogenesis just made easier? (2015)

Humans may harbor more than 100 genes from other organisms (2015)

Bacteria may have multiple replication origins (2015)

Embryonic Stem Cell Specific “Master” Replication Origins at the Heart of the Loss of Pluripotency  PLoS Comput Biol. 2015 Feb; 11(2): e1003969. Published online 2015 Feb 6. doi:  10.1371/journal.pcbi.1003969

Expression of multiple horizontally acquired genes is a hallmark of both vertebrate and invertebrate genomesExpression of multiple horizontally acquired genes is a hallmark of both vertebrate and invertebrate genomes (2015)

Life in an unusual intracellular niche: a bacterial symbiont infecting the nucleus of amoebae (2014)

Mitotic spindle multipolarity without centrosome amplification. (2014)

Cajal bodies: where form meets function (2013)

Revealing Long-Range Interconnected Hubs in Human Chromatin Interaction Data Using Graph Theory (2013) (master replication origins)

Tiny Genomes May Offer Clues to First Plants and Animals (2013)

Recycling Endosomes (2013)

Biogenesis of extracellular vesicles (EV): exosomes, microvesicles, retrovirus-like vesicles, and apoptotic bodies. (2013)

Microvesicles and Virus Infection (2013)  Shed from cells, these microvesicles are similar in nature to enveloped viruses. Are these apoptotic bodies that have escaped destruction?

Evolution: Tracing the origins of centrioles, cilia, and flagella. (2011) Centrosomes and centrioles are found in all eukaryotic phyla, indicating the presence of an ancestral protoeukaryote. 

Bacterial “microtubules” (2011)

Are Cancers New Species? (2011)

Ancient Retroviruses Spurred Evolution Of Gene Regulatory Networks In Humans And Other Primates. (2011)

Whole-Genome Comparison Reveals Novel Genetic Elements That Characterize the Genome of Industrial Strains of Saccharomyces cerevisiae. (2011)

Jumping Gene Cluster Tangles Tree of Life. (2011)

Chlamydia trachomatis infection causes mitotic spindle pole defects independently from its effects on centrosome amplification. (2011)

Evolution of programmed cell fusion: common mechanisms and distinct functions. (2010)

Centrosome clustering and cyclin D1 gene amplification in double minutes are common events in chromosomal unstable bladder tumors. (2010)

Spirochete attachment ultrastructure: Implications for the origin and evolution of cilia. (2010)

Endosymbiotic associations within protists. (2010)

Fragile Genomic Sites Are Associated with Origins of Replication (2009)

Horizontal gene transfer and the evolution of cnidarian stinging cells (2009)

The bacterial replisome: back on track? (2008) Compares a moving replisome model to an older stationary model.

New clues to actin function in chromatin regulation (2008)

Centrosomal RNA correlates with intron-poor nuclear genes in Spisula oocytes. (2008)

Movement of Endosymbiotic Organelles (2007) Actin or tubulin are responsible for movements of mitochondria and chloroplasts within the cell.

Actin-related proteins in chromatin-level control of the cell cycle and developmental transitions (2007)

The nuclear tubular invaginations are dynamic structures inside the nucleus of HeLa cells. (2006)

Centrosome-associated RNA in surf clam oocytes (2006)

Comparative rates of evolution in endosymbiotic nuclear genomes  (2006)  discusses spread of  plastids derived from eukaryotes by means of secondary and tertiary endosymbiosis.

Scientists prove that parts of the cell nuclei are not arranged at random. (2006)

Selective detection and transport of fully matched DNA by DNA-loaded microtubule and kinesin motor protein. (2006).

Tertiary Endosymbiosis Driven Genome Evolution in Dinoflagellate Algae (2005)

Endosymbiotic Bacteriodales bacteria of the flagellated protist Pseudotrichonympha grassii in the gut of the termite Coptotermes formosanus. (2005)

Motor Proteins and endosymbionts (2005)

Nuclear bodies and compartments: functional roles and cellular signalling in health and disease. (2004)

The ring of life provides evidence for a genome fusion origin of eukaryotes (2004)

Endosymbiotic gene transfer: organelle genomes forge eukaryotic chromosomes (2004)

Ligase‐mediated construction of branched DNA strands: a novel DNA joining activity catalyzed by T4 DNA ligase. (2003)

MICROSPORIDIA: Biology Biology and Evolution of Highly Reduced Intracellular Parasites (2002)

Genome Evolution in Bacterial Endosymbionts of Insects. (2002)

Facultative bacterial endosymbionts benefit pea aphids Acyrthosiphon pisum during heat stress. (2002)

Conjugation between bacterial and mammalian cells.  (2001)

Export from Pericentriolar Endocytic Recycling Compartment to Cell Surface Depends on Stable, Detyrosinated (Glu) Microtubules and Kinesin (2001)

Eukaryotic chromosomes made of viruses? (2001)

Origin pairing (‘handcuffing’) as a mode of negative control of P1 plasmid copy number.  (2001) (pdf download available)

Four intracellular genomes direct weevel biology: Nuclear, mitochondrial, principal endosymbiont, and Wolbachia. (1999) (pdf download available)

Interactions of Epstein-Barr virus origins of replication with nuclear matrix in the latent and in the lytic phases of viral infection. (1999)

 

Fungi are more closely related to animals than to plants. (1997)

Archaea and the prokaryote-to-eukaryote transition. (1997) (pdf download available)

Mapping of a replication origin within the promoter region of two unlinked, abundantly transcribed actin genes of Physarum polycephalum. (1996)

Major nonhistone proteins of rat liver chromatin: preliminary identification of myosin, actin, tubulin, and tropomyosin (1996)

Microtubules of the flagellar apparatus are active during prey capture in the chrysophycean alga Epipyxis pulchra (1992)

Higher-order structure of chromatin from resting cells. I. Electron microscopy of chromatin from calf thymus. (1983)

Contractile proteins. Major components of nuclear and chromosome non-histone proteins. (1975)

The fine structure of a nuclear envelope associated endosymbiont of paramecium. (1970)  (pdf download available)

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                        Dissertation References